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obsolete nucleosome positioning
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GO_0016584 |
[OBSOLETE. Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.] |
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obsolete nucleosome modeling
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GO_0016583 |
[OBSOLETE. (Was not defined before being made obsolete).] |
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obsolete non-covalent chromatin modification
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GO_0016582 |
[OBSOLETE. The alteration of DNA or protein in chromatin by the non-covalent addition or removal of chemical groups.] |
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obsolete Sin3 complex
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GO_0016580 |
[OBSOLETE. A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.] |
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GO_0016599
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GO_0016599 |
|
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protein arginylation
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GO_0016598 |
[The conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway.] |
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thienylcyclohexylpiperidine binding
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GO_0016596 |
[Binding to thienylcyclohexylpiperidine.] |
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glutamate binding
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GO_0016595 |
[Binding to glutamate, the anion of 2-aminopentanedioic acid.] |
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glycine binding
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GO_0016594 |
[Binding to glycine, aminoethanoic acid.] |
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Cdc73/Paf1 complex
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GO_0016593 |
[A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.] |
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mediator complex
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GO_0016592 |
[A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The mediator complex is required for activation of transcription of most protein-coding genes, but can also act as a transcriptional corepressor. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.] |
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RNA polymerase II, holoenzyme
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GO_0016591 |
[A nuclear DNA-directed RNA polymerase complex containing an RNA polymerase II core enzyme as well as additional proteins and transcription factor complexes, that are capable of promoter recognition and transcription initiation from an RNA polymerase II promoter in vivo. These additional components may include general transcription factor complexes TFIIA, TFIID, TFIIE, TFIIF, or TFIIH, as well as Mediator, SWI/SNF, GCN5, or SRBs and confer the ability to recognize promoters.] |
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ACF complex
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GO_0016590 |
[An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and generally no other subunits, though Xenopus is an exception with a third non-conserved subunit. ACF plays roles in regulation of RNA polymerase II transcription and in DNA replication and repair.] |
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GO_0016489
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GO_0016489 |
|
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farnesol catabolic process
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GO_0016488 |
[The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.] |
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farnesol metabolic process
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GO_0016487 |
[The chemical reactions and pathways involving the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.] |
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polyprenol catabolic process
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GO_0016095 |
[The chemical reactions and pathways resulting in the breakdown of polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.] |
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obsolete proprotein convertase 2 activator activity
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GO_0016484 |
[OBSOLETE. Required for the maturation and activation of proprotein convertase 2.] |
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tryptophan hydroxylase activator activity
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GO_0016483 |
[Increases the activity of the enzyme tryptophase hydroxylase.] |
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GO_0016481
|
GO_0016481 |
|